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Bioinformatic Analysis Serives
Genome assembly
Structural variant
Population genomics
Molecular marker development
Gene profiling
Web DB integration
Genomic WEB DB
Comparative genomic WEB DB
Integrated WEB DB for Breeding
WEB DB LIST
PHENOTYPING
Technology Introduction
Case Studies
GENOTYPING
XENOTYPE lnc.
LED Lights for Plant Growth
Our Garden, PODZPODZ
Products
Signal transduction metabolic pathway check kit (Pathway Check Kit)
R&D
Analysis Resources
Reference
Target gene DB
Case Studies
CSR
Webzine
Media Reports
Company News
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About Us
Find Us
Contact Us
Family Site
CHAIN
Standard Technique of Cultivation
XENOTYPE
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Our Services
Our Services
Bioinformatic Analysis Serives
Genome assembly
Structural variant
Population genomics
Molecular marker development
Gene profiling
Web DB integration
Genomic WEB DB
Comparative genomic WEB DB
Integrated WEB DB for Breeding
WEB DB LIST
PHENOTYPING
Technology Introduction
Case Studies
GENOTYPING
XENOTYPE lnc.
LED Lights for Plant Growth
Our Garden, PODZPODZ
Products
Signal transduction metabolic pathway check kit (Pathway Check Kit)
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Our Services
Bioinformatic Analysis Serives
Structural variant
Structural variant
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Genome-wide SNP/Indel/SSR
General structural variation analysis
Mutation structural variation analysis
Genome Editing
Analysis of SNP and Indel using Resequencing Data
SNPs (Single nucleotide polymorphisms) and small insertion/deletion polymorphisms are the most frequently occurring polymorphisms in the genome, contributing to genetic diversity and phenotypic variation. When a reference genome is available, resequencing allows for the detection of genomic variations such as SNPs and small insertions/deletions.
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Analysis of SNP and Indel using RNA Data
SNPs (Single nucleotide polymorphisms) and small insertion/deletion polymorphisms are the most frequently occurring polymorphisms in the genome, contributing to genetic diversity and phenotypic variation. Variants such as SNPs and small In/delscan also be analyzed through RNAseqdata. If a reference is available, raw reads can be mapped to the reference genome sequence to search for variants. If no reference is available, variants can be analyzed using sequences generated through assembly.…
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SSR analysis
SSR(Simple Sequence Repeat) is a type of molecular marker commonly used in plants. In each species, the genome contains variations in the number of repeats for specific sequences ranging from 2 to 10 base pairs. SSR markers can be used to search for repeating sequences in the genome or RNA sequence of the plant being analyzed, and to study the variations in SSR among individuals.
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